Biomolecular Simulations Group
SIRAH for AMBER
SIRAH for GROMACS
SIRAH in AMBER
SIRAH in GROMACS
Wednesday, August 1, 2012
SIRAH forcefield in AMBER
Wednesday, August 01, 2012
sirah in amber
Simulation of a coarse grained DNA molecule in implicit solvent
Simulation of a coarse grained DNA molecule in explicit solvent
Multiscale simulation of TBP bound to HIV promoter in implicit solvent
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Benchmark of SIRAH force field on NVIDIA Tesla K40c
We are pleased to announce the results on performance of SIRAH force field running on GPU for two popular MD codes. The set of examples...
SIRAH forcefield in GROMACS
Tutorial 1 Simulation of a coarse grained DNA molecule in explicit solvent Tutorial 2 Hybrid solvation: Plugging S...
SIRAH Force field for amino acids, solvent and nucleotides
Coarse-grain (CG) techniques applied to molecular simulations allow for a considerable extension of the accessible size and time scale...
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Close encounters with DNA By: Maffeo, C.; Yoo, J.; Comer, J...
SIRAH Course, May 2015 - Application is open!
OpenLab: Performing Molecular Simulations with SIRAH force field May 4 th to 8 th , 2015 Institut Pasteur de Montevideo Montevid...
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